API for TSSi
Transcription Start Site Identification
| Global functions | |
|---|---|
| TSSi | Man page |
| TSSi-package | Man page |
| TssData | Man page |
| TssData-TSSi | Man page |
| TssData-class | Man page |
| TssNorm | Man page |
| TssNorm-TSSi | Man page |
| TssNorm-class | Man page |
| TssResult | Man page |
| TssResult-TSSi | Man page |
| TssResult-class | Man page |
| [,TssData,ANY,ANY,ANY-method | Man page |
| [,TssData-method | Man page |
| [,TssNorm,ANY,ANY,ANY-method | Man page |
| [,TssNorm-method | Man page |
| [,TssResult,ANY,ANY,ANY-method | Man page |
| [,TssResult-method | Man page |
| annotation | Man page |
| annotation,TssData-method | Man page |
| annotation-TSSi | Man page |
| asRangedData | Man page |
| asRangedData-TSSi | Man page |
| asRangedData-methods | Man page |
| assessGradPoisson | Man page |
| assessPoisson | Man page |
| counts | Man page |
| counts,TssData-method | Man page |
| counts-TSSi | Man page |
| delta | Man page |
| delta,TssResult-method | Man page |
| delta-TSSi | Man page |
| end,TssData-method | Man page |
| end-TSSi | Man page |
| expect | Man page |
| expect,TssResult-method | Man page |
| expect-TSSi | Man page |
| fit | Man page |
| fit,TssNorm-method | Man page |
| fit-TSSi | Man page |
| get-TSSi | Man page |
| get-methods | Man page |
| idenfify-methods | Man page |
| identifyStartSites | Man page |
| identifyStartSites,TssData-method | Man page |
| identifyStartSites-TSSi | Man page |
| names,TssData-method | Man page |
| names-TSSi | Man page |
| normalizeCounts | Man page |
| normalizeCounts,TssData-method | Man page |
| normalizeCounts-TSSi | Man page |
| normalizeCounts-methods | Man page |
| parameters | Man page |
| parameters,TssData-method | Man page |
| parameters-TSSi | Man page |
| physcoCounts | Man page |
| physcoCounts-TSSi | Man page |
| physcoCounts-data | Man page |
| plot | Man page |
| plot,TssData,ANY-method | Man page |
| plot,TssData-method | Man page |
| plot,TssNorm,ANY-method | Man page |
| plot,TssNorm-method | Man page |
| plot,TssResult,ANY-method | Man page |
| plot,TssResult-method | Man page |
| plot-TSSi | Man page |
| plot-methods | Man page |
| ratio | Man page |
| ratio,TssNorm-method | Man page |
| ratio-TSSi | Man page |
| reads | Man page |
| reads,TssData-method | Man page |
| reads-TSSi | Man page |
| readsAsRangedData | Man page |
| readsAsRangedData,TssData-method | Man page |
| readsAsRangedData-TSSi | Man page |
| segmentizeCounts | Man page |
| segmentizeCounts,integer,integer-method | Man page |
| segmentizeCounts-TSSi | Man page |
| segmentizeCounts-methods | Man page |
| segments | Man page |
| segments,TssData-method | Man page |
| segments-TSSi | Man page |
| segmentsAsRangedData | Man page |
| segmentsAsRangedData,TssData-method | Man page |
| segmentsAsRangedData-TSSi | Man page |
| show,TssData-method | Man page |
| show,TssNorm-method | Man page |
| show,TssResult-method | Man page |
| show-TSSi | Man page |
| start,TssData-method | Man page |
| start-TSSi | Man page |
| subtract-functions | Man page |
| subtractExpectation | Man page |
| subtractExpectation-TSSi | Man page |
| tss | Man page |
| tss,TssResult-method | Man page |
| tss-TSSi | Man page |
| tssAsRangedData | Man page |
| tssAsRangedData,TssResult-method | Man page |
| tssAsRangedData-TSSi | Man page |
