TSSi: Transcription Start Site Identification

Identify and normalize transcription start sites in high-throughput sequencing data.

AuthorJulian Gehring, Clemens Kreutz
Date of publicationNone
MaintainerJulian Gehring <jg-bioc@gmx.com>
LicenseGPL-3
Version1.20.0

View on Bioconductor

Functions

annotation Man page
annotation,TssData-method Man page
annotation-TSSi Man page
asRangedData Man page
asRangedData-methods Man page
asRangedData-TSSi Man page
assessGradPoisson Man page
assessPoisson Man page
counts Man page
counts,TssData-method Man page
counts-TSSi Man page
delta Man page
delta-TSSi Man page
delta,TssResult-method Man page
end,TssData-method Man page
end-TSSi Man page
expect Man page
expect-TSSi Man page
expect,TssResult-method Man page
fit Man page
fit-TSSi Man page
fit,TssNorm-method Man page
get-methods Man page
get-TSSi Man page
idenfify-methods Man page
identifyStartSites Man page
identifyStartSites,TssData-method Man page
identifyStartSites-TSSi Man page
names,TssData-method Man page
names-TSSi Man page
normalizeCounts Man page
normalizeCounts-methods Man page
normalizeCounts,TssData-method Man page
normalizeCounts-TSSi Man page
parameters Man page
parameters,TssData-method Man page
parameters-TSSi Man page
physcoCounts Man page
physcoCounts-data Man page
physcoCounts-TSSi Man page
plot Man page
plot-methods Man page
plot,TssData,ANY-method Man page
plot,TssData-method Man page
plot-TSSi Man page
plot,TssNorm,ANY-method Man page
plot,TssNorm-method Man page
plot,TssResult,ANY-method Man page
plot,TssResult-method Man page
ratio Man page
ratio-TSSi Man page
ratio,TssNorm-method Man page
reads Man page
readsAsRangedData Man page
readsAsRangedData,TssData-method Man page
readsAsRangedData-TSSi Man page
reads,TssData-method Man page
reads-TSSi Man page
segmentizeCounts Man page
segmentizeCounts,integer,integer-method Man page
segmentizeCounts-methods Man page
segmentizeCounts-TSSi Man page
segments Man page
segmentsAsRangedData Man page
segmentsAsRangedData,TssData-method Man page
segmentsAsRangedData-TSSi Man page
segments,TssData-method Man page
segments-TSSi Man page
show,TssData-method Man page
show-TSSi Man page
show,TssNorm-method Man page
show,TssResult-method Man page
start,TssData-method Man page
start-TSSi Man page
subtractExpectation Man page
subtractExpectation-TSSi Man page
subtract-functions Man page
tss Man page
tssAsRangedData Man page
tssAsRangedData-TSSi Man page
tssAsRangedData,TssResult-method Man page
TssData Man page
[,TssData,ANY,ANY,ANY-method Man page
TssData-class Man page
[,TssData-method Man page
TssData-TSSi Man page
TSSi Man page
TSSi-package Man page
TssNorm Man page
[,TssNorm,ANY,ANY,ANY-method Man page
TssNorm-class Man page
[,TssNorm-method Man page
TssNorm-TSSi Man page
TssResult Man page
[,TssResult,ANY,ANY,ANY-method Man page
TssResult-class Man page
[,TssResult-method Man page
TssResult-TSSi Man page
tss-TSSi Man page
tss,TssResult-method Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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