Write.Results: Save TargetSearch result objects into files

In TargetSearch: A package for the analysis of GC-MS metabolite profiling data

Description

This is a convenient function to save the TargetSearch result into text files.

Usage

Write.Results(Lib, metabProfile, quantMatrix=c('maxint','maxobs','none'),
	prefix = NA)

Arguments

Lib	A tsLib object.
metabProfile	A tsProfile object. The final result of the package. This object is generated by either Profile or ProfileCleanUp.
quantMatrix	Should an intensity matrix using quantification masses be created? This parameter will be passed to quantMatrix and indicates whether the quantification mass should be chosen based on intensity or observations. The file will have the extension '.profile.quantmatrix.txt'. If none, then the file is not created.
prefix	A character string. This is used as a name prefix for the written files. "TargetSearch-" is used by default.

Value

This function doesn't return anything. Just print a message with the saved files.

Author(s)

Alvaro Cuadros-Inostroza, Matthew Hannah, Henning Redestig

See Also

peakFind, Profile, ProfileCleanUp, tsLib, tsMSdata, tsProfile, quantMatrix

TargetSearch documentation built on March 12, 2021, 2 a.m.