This function is used to create indices for making Venn diagrams or
vennCounts objects. This is an internal method and is not intended to
be called by the end user.
makeIndices(x, method = "same")
One of "same", "up", "down", "both", indicating direction of
differential expression. See details of
A list containing
FALSE values, to be used by
James W. MacDonald <email@example.com>
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