API for altcdfenvs
alternative CDF environments (aka probeset mappings)
| Global functions | |
|---|---|
| AffyProbesMatch-class | Man page |
| CdfEnv | Man page |
| CdfEnvAffy-class | Man page |
| [,CdfEnvAffy,character,missing,missing-method | Man page |
| appendCdfEnvAffy | Man page Source code |
| buildCdfEnv.biostrings | Man page Source code |
| buildCdfEnv.matchprobes | Man page Source code |
| cdfenvEx | Man page |
| coerce,CdfEnvAffy,Cdf-method | Man page |
| coerce,CdfEnvAffy,environment-method | Man page |
| combine,AffyProbesMatch,AffyProbesMatch-method | Man page |
| copyCdfEnvAffy | Man page Source code |
| countduplicated | Man page Source code |
| countskip.FASTA.entries | Man page Source code |
| geneNames,CdfEnvAffy-method | Man page |
| geneNames.AltAffyBatch | Man page |
| geneNames.CdfEnvAffy | Man page Source code |
| getCdfEnvAffy | Man page Source code |
| getxy.probeseq | Man page Source code |
| grep.FASTA.entry | Man page Source code |
| index2xy | Man page |
| index2xy,CdfEnvAffy-method | Man page |
| index2xy.AltAffyBatch | Man page |
| index2xy.CdfEnvAffy | Man page Source code |
| indexProbes,CdfEnvAffy,character-method | Man page |
| indexProbes.AltAffyBatch | Man page |
| indexProbes.CdfEnvAffy | Man page Source code |
| matchAffyProbes | Man page Source code |
| mmProbes | Man page Source code |
| plot,CdfEnvAffy,missing-method | Man page |
| plot.CdfEnvAffy | Man page Source code |
| print.FASTA | Man page Source code |
| printValidCdfEnvAffy | Man page Source code |
| read.FASTA.entry | Man page Man page Source code |
| read.n.FASTA.entries | Man page Source code |
| read.n.FASTA.entries.split | Man page Source code |
| read.n.FASTA.headers | Man page Source code |
| read.n.FASTA.sequences | Man page Source code |
| removeIndex | Man page Source code |
| show,AffyProbesMatch-method | Man page |
| show,CdfEnvAffy-method | Man page |
| skip.FASTA.entry | Man page Source code |
| toHypergraph | Man page Source code |
| toHypergraph,AffyProbesMatch-method | Man page |
| toHypergraph,CdfEnvAffy-method | Man page |
| unique.CdfEnvAffy | Man page Source code |
| validAffyBatch | Man page Source code |
| validCdfEnvAffy | Man page Source code |
| wrapCdfEnvAffy | Man page Source code |
| write.FASTA | Man page Source code |
| xy2index | Man page |
| xy2index,CdfEnvAffy-method | Man page |
| xy2index.AltAffyBatch | Man page |
| xy2index.CdfEnvAffy | Man page Source code |
