indexProbes.CdfEnvAffy: indexes for probes
In altcdfenvs: alternative CDF environments (aka probeset mappings)

Description Usage Arguments Details Value See Also

A function to get the index for probes

1	indexProbes.CdfEnvAffy(object, which, probeSetNames = NULL)

object

CdfEnvAffy

`which`	which kind of probe are of interest (see details).
`probeSetNames`	names of the probe sets of interest. If `NULL`, all the probe sets are considered.

The parameter which let one specify which category of probes are of interest. In the case of Affymetrix chips, probes can be "pm" probes or "mm" probes. It the parameter is set to c("pm", "mm"), both are returned. Should other categories be defined, they can be handled as well.

A list of indexes.

CdfEnvAffy-class, AffyBatch-class

altcdfenvs documentation built on Nov. 8, 2020, 7:12 p.m.