diversity_beta_boxplot: Beta diversity boxplot

Description Usage Arguments Value Examples

View source: R/diversity_beta_boxplot.R

Description

Beta diversity boxplot

Usage

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diversity_beta_boxplot(
  MAE,
  tax_level,
  input_beta_method,
  input_select_beta_condition
)

Arguments

MAE

A multi-assay experiment object

tax_level

The taxon level used for organisms

input_beta_method

bray, jaccard

input_select_beta_condition

Which condition to group samples

Value

A plotly object

Examples

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data_dir = system.file('extdata/MAE.rds', package = 'animalcules')
toy_data <- readRDS(data_dir)
p <- diversity_beta_boxplot(toy_data,
                            tax_level = 'genus',
                            input_beta_method = 'bray',
                            input_select_beta_condition = 'DISEASE')
p

animalcules documentation built on Nov. 8, 2020, 6:47 p.m.