find_taxon_mat: Find the Taxonomy Information Matrix
In animalcules: Interactive microbiome analysis toolkit
Description
Usage
Arguments
Value
Examples
View source: R/find_taxon_mat.R
Description
Find the Taxonomy Information Matrix
Usage
1
find_taxon_mat(names, taxonLevels)
Arguments
names
Row names of the taxonomy matrix
taxonLevels
Taxon Levels of all tids
Value
taxmat Taxonomy Information Matrix
Examples
1
2
3
4
ids <- c("ti|54005", "ti|73001", "ti|573", "ti|228277", "ti|53458")
tids <- c("54005", "73001", "573", "228277", "53458")
taxonLevels <- find_taxonomy(tids)
tax_table <- find_taxon_mat(ids, taxonLevels)
animalcules documentation built on Nov. 8, 2020, 6:47 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/find_taxon_mat.R
Description
Find the Taxonomy Information Matrix
Usage
1 | find_taxon_mat(names, taxonLevels)
|
Arguments
names |
Row names of the taxonomy matrix |
taxonLevels |
Taxon Levels of all tids |
Value
taxmat Taxonomy Information Matrix
Examples
1 2 3 4 | ids <- c("ti|54005", "ti|73001", "ti|573", "ti|228277", "ti|53458")
tids <- c("54005", "73001", "573", "228277", "53458")
taxonLevels <- find_taxonomy(tids)
tax_table <- find_taxon_mat(ids, taxonLevels)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.