annmap provides annotation mappings for Affymetrix exon arrays and coordinate based queries to support deep sequencing data analysis. Database access is hidden behind the API which provides a set of functions such as genesInRange(), geneToExon(), exonDetails(), etc. Functions to plot gene architecture and BAM file data are also provided. Underlying data are from Ensembl.
|Author||Tim Yates <Tim.Yates@cruk.manchester.ac.uk>|
|Bioconductor views||Annotation Microarray OneChannel ReportWriting Transcription Visualization|
|Maintainer||Chris Wirth <Christopher.Wirth@cruk.manchester.ac.uk>|
|Package repository||View on Bioconductor|
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