annotatr: annotatr: Annotation of Genomic Regions to Functional...
In annotatr: Annotation of Genomic Regions to Genomic Annotations
Description
Given a set of genomic sites/regions (e.g. ChIP-seq peaks, CpGs, differentially methylated CpGs or regions, SNPs, etc.) it is often of interest to investigate the intersecting functional annotations. Such annotations include those relating to gene models (promoters, 5'UTRs, exons, introns, and 3'UTRs), CpGs (CpG islands, CpG shores, CpG shelves), the non-coding genome, and enhancers. The annotatr package provides an easy way to summarize and visualize the intersection of genomic sites/regions with the above functional annotations.
annotatr documentation built on Nov. 8, 2020, 8:16 p.m.
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Description
Given a set of genomic sites/regions (e.g. ChIP-seq peaks, CpGs, differentially methylated CpGs or regions, SNPs, etc.) it is often of interest to investigate the intersecting functional annotations. Such annotations include those relating to gene models (promoters, 5'UTRs, exons, introns, and 3'UTRs), CpGs (CpG islands, CpG shores, CpG shelves), the non-coding genome, and enhancers. The annotatr package provides an easy way to summarize and visualize the intersection of genomic sites/regions with the above functional annotations.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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