meta-methods: fixed meta-analysis

In bacon: Controlling bias and inflation in association studies using the empirical null distribution

Description

Perform fixed meta-analysis using inflation and bias corrected effect-sizes and standard errors

Usage

meta(object, corrected = TRUE, ...)

## S4 method for signature 'Bacon'
meta(object, corrected = TRUE, ...)

Arguments

object	'bacon'-object
corrected	optional return uncorrected
...	additional arguments

Details

TODO maybe add idea's from http://www.netstorm.be/home/meta_analysis#metaAnalysisU

Value

object of class 'bacon' with added fixed-effect meta-analysis test-statistics, effect-sizes and standard-errors

See Also

bacon

Examples

es <- replicate(6, rnormmix(2000, c(0.9, 0, 1, 0, 4, 1)))
se <- replicate(6, 0.8*sqrt(4/rchisq(2000,df=4)))
bc <- bacon(NULL, es, se)
mbc <- meta(bc)

Example output

Loading required package: ggplot2
Loading required package: BiocParallel
Loading required package: ellipse

Attaching package: ‘ellipse’

The following object is masked from ‘package:graphics’:

    pairs

sh: 1: wc: Permission denied
Did you registered a biocparallel back-end?
 Continuing serial!

bacon documentation built on Nov. 8, 2020, 4:54 p.m.