Man pages for bambu
Reference-guided isoform reconstruction and quantification for long read RNA-Seq data
| bambu | long read isoform reconstruction and quantification |
| plotBambu | plot.bambu |
| prepareAnnotations | prepare annotations from txdb object or gtf file |
| readFromGTF | convert a GTF file into a GRangesList |
| transcriptToGeneExpression | transcript to gene expression |
| writeBambuOutput | Write bambu results to GTF and transcript/gene-count files |
| writeToGTF | write GRangeslist into GTF file |
