transcriptToGeneExpression: transcript to gene expression
In bambu: Reference-guided isoform reconstruction and quantification for long read RNA-Seq data
Description
Usage
Arguments
Value
Examples
View source: R/transcriptToGeneExpression.R
Description
Reduce transcript expression to gene expression
Usage
1
Arguments
se
a summarizedExperiment object from bambu
Value
A SummarizedExperiment object
Examples
1
2
3
4
5
se <- readRDS(system.file("extdata",
"seOutput_SGNex_A549_directRNA_replicate5_run1_chr9_1_1000000.rds",
package = "bambu"
))
transcriptToGeneExpression(se)
bambu documentation built on Nov. 12, 2020, 2:01 a.m.
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Description Usage Arguments Value Examples
View source: R/transcriptToGeneExpression.R
Description
Reduce transcript expression to gene expression
Usage
1 |
Arguments
se |
a summarizedExperiment object from |
Value
A SummarizedExperiment object
Examples
1 2 3 4 5 | se <- readRDS(system.file("extdata",
"seOutput_SGNex_A549_directRNA_replicate5_run1_chr9_1_1000000.rds",
package = "bambu"
))
transcriptToGeneExpression(se)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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