Quality Assessment, processing and analysis of Illumina microarray data
The package is able to read bead-level data (raw TIFFs and text files) output by BeadScan as well as bead-summary data from BeadStudio. Methods for quality assessment and low-level analysis are provided.
Mark Dunning, Mike L. Smith, Jonathan Cairns, Andy Lynch, Matt Ritchie
Dunning MJ, Smith ML, Ritchie ME and Tavaré S (2007). “beadarray: R classes and methods for Illumina bead-based data.” Bioinformatics, 23(16), pp. 2183–4.
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