Man pages for biomvRCNS
Copy Number study and Segmentation for multivariate biological data
| biomvRCNS-class | Class '"biomvRCNS"' |
| biomvRGviz | Plot segmentation result using Gviz |
| biomvRhsmm | Estimating the most likely state sequence using Hidden Semi... |
| biomvRmgmr | Batch process multiple sequences and samples using... |
| biomvRseg | Homogeneous segmentation of multi-sample genomic data |
| coriell | Array CGH data set of Coriell cell lines |
| encodeTP53 | mapped RNA-seq data from ENCODE |
| hsmmRun | Estimating the most likely state sequence using Hidden Semi... |
| maxGapminRun | Max-gap-min-run algorithm for 2 states segmentation |
| regionSegAlphaNB | Estimate matrix of dispersion parameter alpha (size) used in... |
| regionSegCost | Regional segmentation cost matrix |
| simSegData | Simulate exemplary segmentation data. |
| sojournAnno | Estimate sojourn distribution parameters from posterior... |
| splitFarNeighbour | Split segments if long gaps exist between feature positions |
| variosm | Differential methylation data from sequencing |
