simSegData: Simulate exemplary segmentation data.

In biomvRCNS: Copy Number study and Segmentation for multivariate biological data

Description

Simulate exemplary segmentation data.

Usage

simSegData(nseg=10, J=3, soj, emis, seed=1234, toPlot=FALSE)

Arguments

nseg	size of initial segments pool
J	states number
soj	a list object containing sojourn settings
emis	a list object containing emission settings
seed	seed for simulation
toPlot	whether to output a pdf image of the simulated series

Value

a list object containing the simulated data and the segment info

E	a numeric vector of the simulated data serie
L	a vector of the length for each continuous segment
S	a vector of state assignment for each segment
pdf	the name of the output pdf file if any

Examples

	soj<-list(type='pois', lambda=c(200, 100, 10))
	emis<-list(type='pois', lambda=1:3)
	simSegData(soj=soj, emis=emis)

biomvRCNS documentation built on Nov. 8, 2020, 6:49 p.m.