aggregateAndPreprocess: Aggregate data

In blima: Tools for the preprocessing and analysis of the Illumina microarrays on the detector (bead) level

Description

This function is not intended to direct use. It helps perform work of doProbeTTests function. For each probe it prints mean and sd of an quality.

Usage

aggregateAndPreprocess(x, quality = "qua", transformation = NULL)

Arguments

x	Two column matrix to agregate with columns "ProbeID" and quality.
quality	Quality to analyze, default is "qua".
transformation	Function of input data trasformation, default is NULL. Any function which for input value returns transformed value may be supplied. T-test then will be evaluated on transformed data, consider use log2TranformPositive.

Value

Some return value

Author(s)

Vojt<c4><9b>ch Kulvait

blima documentation built on Nov. 8, 2020, 8:15 p.m.