tis_in_region: List of regions that are supported by given tissue

In brainImageR: A Framework for visualizing gene set enrichment throughout neurodevelopment

Description

Brain areas supported by tissue of interest. Opposite=tis_set()

Usage

tis_in_region(composite, tissue_abrev)

Arguments

composite	object returned from SpatialEnrichment or CreateBrain
tissue_abrev	abreviation of the microdissected tissue of interest.

Value

general brain areas

Examples

#brainImageR:::loadworkspace()
##Load in a gene set
data(vth)
##calculate spatial enrichment
#composite <- SpatialEnrichment(vth, reps = 20, refset = "developing")
#tis_in_region(composite, "LHAa")

brainImageR documentation built on May 6, 2019, 3:54 a.m.