BreakPoint: BreakPoint object
In breakpointR: Find breakpoints in Strand-seq data
Description
The BreakPoint object is output of the function runBreakpointr and is basically a list with various entries. The class() attribute of this list was set to "BreakPoint". Entries can be accessed with the list operators '[[]]' and '$'.
Value
fragments
A GRanges-class object with read fragments.
deltas
A GRanges-class object with deltaWs.
breaks
A GRanges-class object containing the breakpoint coordinates.
counts
A GRanges-class object with the regions between breakpoints.
params
A vector with parameters that were used to obtain the results.
See Also
runBreakpointr
breakpointR documentation built on Nov. 8, 2020, 8:04 p.m.
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Description
The BreakPoint object is output of the function runBreakpointr and is basically a list with various entries. The class() attribute of this list was set to "BreakPoint". Entries can be accessed with the list operators '[[]]' and '$'.
Value
fragments |
A |
deltas |
A |
breaks |
A |
counts |
A |
params |
A vector with parameters that were used to obtain the results. |
See Also
runBreakpointr
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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