removeDoubleSCEs: Process double SCE chromosomes: with internal WC region.
In breakpointR: Find breakpoints in Strand-seq data
Description
Usage
Arguments
Value
Description
This function will take from a double SCE chromosome only WW or CC region (Longer region is taken).
Usage
1
removeDoubleSCEs(gr, collapseWidth = 5e+06)
Arguments
gr
A GRanges-class object.
collapseWidth
A segment size to be collapsed with neighbouring segments.
Value
The input GRanges-class object with only WW or CC region retained.
breakpointR documentation built on Nov. 8, 2020, 8:04 p.m.
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Description Usage Arguments Value
Description
This function will take from a double SCE chromosome only WW or CC region (Longer region is taken).
Usage
1 | removeDoubleSCEs(gr, collapseWidth = 5e+06)
|
Arguments
gr |
A |
collapseWidth |
A segment size to be collapsed with neighbouring segments. |
Value
The input GRanges-class object with only WW or CC region retained.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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