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ChIP-Enrich and Poly-Enrich perform gene set enrichment testing using peaks called from a ChIP-seq experiment. The method empirically corrects for confounding factors such as the length of genes, and the mappability of the sequence surrounding genes.
Package details |
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| Author | Ryan P. Welch [aut, cph], Chee Lee [aut], Raymond G. Cavalcante [aut, cre], Chris Lee [aut], Laura J. Scott [ths], Maureen A. Sartor [ths] |
| Bioconductor views | ChIPSeq Epigenetics FunctionalGenomics GeneSetEnrichment HistoneModification ImmunoOncology Regression |
| Maintainer | Raymond G. Cavalcante <rcavalca@umich.edu> |
| License | GPL-3 |
| Version | 2.14.0 |
| Package repository | View on Bioconductor |
| Installation |
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