chromPlot: Global visualization tool of genomic data

Package designed to visualize genomic data along the chromosomes, where the vertical chromosomes are sorted by number, with sex chromosomes at the end.

AuthorRicardo A. Verdugo and Karen Y. Orostica
Date of publicationNone
MaintainerKaren Y. Orostica <korostica09@gmail.com>
LicenseGPL (>= 2)
Version1.2.0

View on Bioconductor

Files in this package

chromPlot/DESCRIPTION
chromPlot/NAMESPACE
chromPlot/NEWS
chromPlot/R
chromPlot/R/chromplot-Internal.R chromPlot/R/chromplot.R
chromPlot/build
chromPlot/build/vignette.rds
chromPlot/data
chromPlot/data/hg_cytoBandIdeo.rda
chromPlot/data/hg_gap.rda
chromPlot/data/mm10_cytoBandIdeo.rda
chromPlot/data/mm10_gap.rda
chromPlot/inst
chromPlot/inst/doc
chromPlot/inst/doc/chromPlot.R
chromPlot/inst/doc/chromPlot.Rnw
chromPlot/inst/doc/chromPlot.pdf
chromPlot/inst/extdata
chromPlot/inst/extdata/CLG_AIMs_150_chr_hg19_v2_SNP_rs_rn.csv
chromPlot/inst/extdata/Fst_CEU-YRI-W200Chr19-21.bed
chromPlot/inst/extdata/GenesDEChr17-19.bed
chromPlot/inst/extdata/QTL.csv
chromPlot/inst/extdata/XPEHH_CEU-YRIChr19-21
chromPlot/inst/extdata/ancestry_humanChr19-21.txt
chromPlot/inst/extdata/arrayChr17-19.txt
chromPlot/inst/extdata/donor_regions.csv
chromPlot/inst/extdata/hg19_refGeneChr19-21.txt
chromPlot/inst/extdata/iHS_CEUChr19-21
chromPlot/inst/extdata/mm10_refGeneChr2-11-17-19.txt
chromPlot/inst/extdata/monocitosDEChr19-21.txt
chromPlot/inst/extdata/phenogram-ancestry-sample.txt
chromPlot/inst/extdata/sinteny_Hg-mm10Chr19-21.txt
chromPlot/man
chromPlot/man/chromPlot-package.Rd chromPlot/man/chromPlot.Rd chromPlot/man/hg_cytoBandIdeo.Rd chromPlot/man/hg_gap.Rd chromPlot/man/mm10_cytoBandIdeo.Rd chromPlot/man/mm10_gap.Rd
chromPlot/vignettes
chromPlot/vignettes/chromPlot.Rnw

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