ctsGE: Clustering of Time Series Gene Expression data

Methodology for supervised clustering of potentially many predictor variables, such as genes etc., in time series datasets Provides functions that help the user assigning genes to predefined set of model profiles.

AuthorMichal Sharabi-Schwager [aut, cre], Ron Ophir [aut]
Date of publicationNone
MaintainerMichal Sharabi-Schwager <michalsharabi@gmail.com>
LicenseGPL-2
Version1.0.0
https://github.com/michalsharabi/ctsGE

View on Bioconductor

Files in this package

ctsGE/DESCRIPTION
ctsGE/NAMESPACE
ctsGE/R
ctsGE/R/ClustIndexes.R ctsGE/R/PlotIndexesClust.R ctsGE/R/PreparingTheIndexes.R ctsGE/R/ctsGE.R ctsGE/R/ctsGEShinyApp.R
ctsGE/README.md
ctsGE/build
ctsGE/build/vignette.rds
ctsGE/inst
ctsGE/inst/doc
ctsGE/inst/doc/ctsGE.R
ctsGE/inst/doc/ctsGE.Rmd
ctsGE/inst/doc/ctsGE.html
ctsGE/inst/extdata
ctsGE/inst/extdata/GSM37929.xls
ctsGE/inst/extdata/GSM37930.xls
ctsGE/inst/extdata/GSM37931.xls
ctsGE/inst/extdata/GSM37932.xls
ctsGE/inst/extdata/GSM37933.xls
ctsGE/inst/extdata/GSM37934.xls
ctsGE/man
ctsGE/man/ClustIndexes.Rd ctsGE/man/PlotIndexesClust.Rd ctsGE/man/PreparingTheIndexes.Rd ctsGE/man/ctsGEShinyApp.Rd ctsGE/man/index.Rd ctsGE/man/readTSGE.Rd
ctsGE/tests
ctsGE/tests/testthat
ctsGE/tests/testthat.R
ctsGE/tests/testthat/test.ctsGE.R
ctsGE/vignettes
ctsGE/vignettes/ctsGE.Rmd

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