Files in cydar
Using Mass Cytometry for Differential Abundance Analyses

DESCRIPTION
NAMESPACE
inst/NEWS.Rd
inst/doc/cydar.html
inst/doc/cydar.Rmd inst/doc/cydar.R vignettes/cydar.Rmd R/prepareCellData.R R/CyData.R R/plotCells.R R/findFirstSphere.R R/poolCells.R R/spatialFDR.R R/expandRadius.R R/recountCells.R R/packIndices.R R/labelSpheres.R R/utils.R R/intensityRanges.R R/countCells.R R/diffIntDistr.R R/neighborDistances.R R/multiIntHist.R R/medIntensities.R R/interpretSpheres.R R/pickBestMarkers.R R/gates.R R/normalizeBatch.R
src/count_cells.cpp
src/compute_median_int.cpp
src/init.cpp
src/find_knn.cpp
src/recount.cpp
src/drop_redundant.cpp
src/cydar.h
src/objects.h
src/utils.cpp
src/objects.cpp
src/utils.h
src/compute_density.cpp
src/compute_hyperstats.cpp
src/get_nndist.cpp
src/pack_indices.cpp
src/packer.h
man/diffIntDistr.Rd man/labelSpheres.Rd man/pickBestMarkers.Rd man/plotCells.Rd man/recountCells.Rd man/multiIntHist.Rd man/cyData-subset.Rd man/prepareCellData.Rd man/normalizeBatch.Rd man/packIndices.Rd man/neighborDistances.Rd man/cyData-getset.Rd man/outlierGate.Rd man/countCells.Rd man/spatialFDR.Rd man/findFirstSphere.Rd man/cyData-class.Rd man/intensityRanges.Rd man/medIntensities.Rd man/expandRadius.Rd man/dnaGate.Rd man/poolCells.Rd man/interpretSpheres.Rd
build/vignette.rds
tests/testthat.R tests/testthat/test-class.R tests/testthat/test-recount.R tests/testthat/test-prep.R tests/testthat/test-first.R tests/testthat/test-pack.R tests/testthat/test-spatial.R tests/testthat/test-plot.R tests/testthat/test-counts.R tests/testthat/test-dist.R tests/testthat/test-norm.R tests/testthat/test-medint.R
cydar documentation built on May 2, 2018, 2:50 a.m.