cydar: Using Mass Cytometry for Differential Abundance Analyses

Identifies differentially abundant populations between samples and groups in mass cytometry data. Provides methods for counting cells into hyperspheres, controlling the spatial false discovery rate, and visualizing changes in abundance in the high-dimensional marker space.

Package details

AuthorAaron Lun [aut, cre]
Bioconductor views FlowCytometry ImmunoOncology MultipleComparison Proteomics SingleCell
MaintainerAaron Lun <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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cydar documentation built on April 17, 2021, 6:01 p.m.