Sun_annotation: Sun's annotation measure of disease similarity calculating

Description Usage Arguments Value Author(s) References Examples

View source: R/Sun.R

Description

given two vectors of diseases and a list of disease-gene associations, this function will calculate disease similarity by method Sun_annotation

Usage

1
Sun_annotation(D1, D2, d2g)

Arguments

D1

a vector consists disease ids

D2

another vector consists disease ids

d2g

a list of disease-gene associations

Value

a matrix of disease disease simialrity which rownames is D1 and colnames is D2

Author(s)

Peng Ni, Min Li

References

Sun K, Goncalves JP, Larminie C. Predicting disease associations via biological network analysis[J]. BMC bioinformatics, 2014, 15(1): 304.

Examples

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dSimer documentation built on Nov. 17, 2017, 12:51 p.m.