dSimer-package: Integration of Disease Similarity Methods

Description Details Author(s)

Description

dSimer is an R package which provides computation of nine methods for measuring disease-disease similarity, including a standard cosine similarity measure and eight function-based methods. The disease similarity matrix obtained from these nine methods can be visualized through heatmap and network. Biological data widely used in disease-disease associations study are also provided by dSimer.

Details

Package: dSimer
Type: Package
Version: 1.1.0
Date: 12-10-2015
biocViews: Software, Visualization, Network
Depends: R (>= 3.3.0), igraph (>= 1.0.1)
Imports: stats, Rcpp (>= 0.11.3), ggplot2, reshape2, GO.db, AnnotationDbi, org.Hs.eg.db, graphics
Suggests: knitr, rmarkdown, BiocStyle
LinkingTo: Rcpp
License: GPL (>= 2)

Author(s)

Min Li, Peng Ni


dSimer documentation built on May 2, 2019, 12:40 a.m.