diffHic: Differential Analyis of Hi-C Data
Version 1.8.1

Detects differential interactions across biological conditions in a Hi-C experiment. Methods are provided for read alignment and data pre-processing into interaction counts. Statistical analysis is based on edgeR and supports normalization and filtering. Several visualization options are also available.

Package details

AuthorAaron Lun <alun@wehi.edu.au>
Bioconductor views Alignment Clustering Coverage HiC MultipleComparison Normalization Preprocessing Sequencing
MaintainerAaron Lun <alun@wehi.edu.au>
Package repositoryView on Bioconductor
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diffHic documentation built on May 31, 2017, 3:29 p.m.