se.DM: se.DM Function to convert SummarizedExperiment object to LME4...
In doseR: doseR
Description
Usage
Arguments
Details
Value
Author(s)
References
Examples
Description
This function generates LME4 input.
Usage
1
Arguments
se
A SummarizedExperiment object containing FPKM values and at least
one annotation column.
weightByLL
Logical, weigh by log likelihood score.
Details
This function converts SummarizedExperiment object.
Value
Returns LME4 input.
Author(s)
AJ Vaestermark, JR Walters.
References
The "doseR" package, 2018 (in press).
Examples
1
2
3
data(hmel.se)
f_se <- quantFilter(se, lo.bound = 0.4, hi.bound = 0.5)
dm <- se.DM(f_se)
doseR documentation built on Nov. 8, 2020, 5:37 p.m.
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Description Usage Arguments Details Value Author(s) References Examples
Description
This function generates LME4 input.
Usage
1 |
Arguments
se |
A SummarizedExperiment object containing FPKM values and at least one annotation column. |
weightByLL |
Logical, weigh by log likelihood score. |
Details
This function converts SummarizedExperiment object.
Value
Returns LME4 input.
Author(s)
AJ Vaestermark, JR Walters.
References
The "doseR" package, 2018 (in press).
Examples
1 2 3 | data(hmel.se)
f_se <- quantFilter(se, lo.bound = 0.4, hi.bound = 0.5)
dm <- se.DM(f_se)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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