upsetplot-methods: upsetplot method

In enrichplot: Visualization of Functional Enrichment Result

Description

upsetplot method generics

Usage

upsetplot(x, ...)

## S4 method for signature 'enrichResult'
upsetplot(x, n = 10, ...)

## S4 method for signature 'gseaResult'
upsetplot(x, n = 10, ...)

Arguments

x	object
...	additional parameters
n	number of categories to be plotted

Value

plot

Author(s)

Guangchuang Yu

Examples

require(DOSE)
data(geneList)
de=names(geneList)[1:100]
x <- enrichDO(de)
upsetplot(x, 8)

Example output

Loading required package: DOSE
DOSE v3.16.0  For help: https://guangchuangyu.github.io/software/DOSE

If you use DOSE in published research, please cite:
Guangchuang Yu, Li-Gen Wang, Guang-Rong Yan, Qing-Yu He. DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics 2015, 31(4):608-609

enrichplot documentation built on Jan. 30, 2021, 2:01 a.m.