userobj: GenomicRanges object generation

Description Usage Arguments Value Examples

View source: R/userobj.R

Description

generate GenomicRanges object for DEH loci

Usage

1

Arguments

data

a data frame containing the chromosome number, loci and strand information of DEH loci generated from diffHet() function.

Value

A GenomicRanges object

Examples

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data<-data.frame(chromosome=c('chr1','chr1','chr1'),
loci=c('6480531:6480554:6480561:6480565','6647655:6647696:6647701:6647705',
'7130155:7130172:7130179:7130188'),
strand=c('+','-','+'),stringsAsFactors = FALSE)
userobj(data)

epihet documentation built on Dec. 31, 2020, 2:01 a.m.