EpivizChart-class: Data container for an Epiviz chart component.

Description Fields Methods

Description

Data container for an Epiviz chart component.

Fields

data

(list) Values of an epiviz chart's data attribute.

colors

(character) Epiviz chart's colors attribute.

settings

(list) Epiviz chart's settings attribute.

parent

An object of class EpivizEnvironment where chart is appended.

Methods

get_attributes()

Get attributes for rendering chart

get_available_settings()

Get available settings

get_colors()

Get chart colors

get_data()

Get chart data

get_parent()

Get parent

get_settings()

Get chart settings

navigate(chr, start, end)

Navigate chart to a genomic location

chr

Chromosome

start

Start location

end

End location

render_component(shiny = FALSE)

Render to html

revisualize(chart_type)

Revisualize chart as the given chart type

chart_type

The type of chart to be visualized (BlocksTrack, HeatmapPlot, LinePlot, LineTrack, ScatterPlot, StackedLinePlot, StackedLineTrack)

set_colors(colors)

Set chart colors

set_data(data)

Set chart data

set_settings(settings)

Modify current settings

settings

List of new settings. Call get_available_settings for settings available to modify.


epivizrChart documentation built on Nov. 1, 2018, 3:24 a.m.