epivizNav: Initialize an 'EpivizNavigation' object to visualize in...

Description Usage Arguments Value Examples

View source: R/util-inits.R

Description

Initialize an EpivizNavigation object to visualize in viewer or knit to HTML.

Usage

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epivizNav(chr = NULL, start = NULL, end = NULL, parent = NULL,
  interactive = FALSE, ...)

Arguments

chr

The chromosome to filter on, e.g., chr="chr11".

start

The start location, e.g., start=99800000.

end

The end location, e.g., end=130383180.

parent

An object of class EpivizEnvironment or EpivizNavigation to append the chart within.

interactive

(logical) enable if running a websocket/shiny server

...

Additional arguments for initializing navigation, e.g., gene and geneInRange.

Value

An object of class EpivizNavigation.

Examples

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epiviz <- epivizNav(chr="chr11", start=99800000, end=103383180)

epivizrChart documentation built on Nov. 1, 2018, 3:24 a.m.