API for explorase
GUI for exploratory data analysis of systems biology data
| Global functions | |
|---|---|
| .dend.coords | Source code |
| .sampleGenotypeApply | Source code |
| MAplot_cb | Source code |
| MnuAngle_cb | Source code |
| MnuCanberra_cb | Source code |
| MnuCompareCorr_cb | Source code |
| MnuCompareCov_cb | Source code |
| MnuCorr_cb | Source code |
| MnuDiff_cb | Source code |
| MnuEuclidean_cb | Source code |
| MnuExit_cb | Source code |
| MnuFindPattern_cb | Source code |
| MnuHClust | Source code |
| MnuHClust_canberra_cb | Source code |
| MnuHClust_cor_cb | Source code |
| MnuHClust_euclidean_cb | Source code |
| MnuHClust_euclidean_std_cb | Source code |
| MnuHClust_spearman_cb | Source code |
| MnuHClust_zerocor_cb | Source code |
| MnuMahalanobis_cb | Source code |
| MnuOpenFile_cb | Source code |
| MnuOpenProject_cb | Source code |
| MnuRegression_cb | Source code |
| MnuSaveEntityInfo_cb | Source code |
| MnuSaveEntityLists_cb | Source code |
| MnuSaveProject_cb | Source code |
| MnuZerocorr_cb | Source code |
| activateAllRules_cb | Source code |
| activateToggle_cb | Source code |
| addColorsToMenu | Source code |
| addEntities | Source code |
| addFilterRule | Source code |
| addGGobiVariable | Source code |
| addInfoColumns | Source code |
| addProgress | Source code |
| addResultColumn | Source code |
| addSamples | Source code |
| aggregateReps | Source code |
| applyByReps | Source code |
| applyFilter | Source code |
| applyFilterRule_cb | Source code |
| applyLimma_cb | Source code |
| applySubset_cb | Source code |
| applyTemporal_cb | Source code |
| assert | Source code |
| average_cb | Source code |
| browseBtn_cb | Source code |
| calcMaxFoldChange | Source code |
| calcMinRepVar | Source code |
| calcMinValue | Source code |
| clearBtn_cb | Source code |
| clearTask | Source code |
| color.click.dn | Source code |
| colorBtn_cb | Source code |
| colorMenuToolButton | Source code |
| columnBoxRowSeparator_func | Source code |
| columnModel | Source code |
| columnView | Source code |
| configureViewColumn | Source code |
| configureViewColumns | Source code |
| createDataModel | Source code |
| createGGobiDisplay | Source code |
| createList | Source code |
| createList_cb | Source code |
| createVarName | Source code |
| deactivateAllRules_cb | Source code |
| deleteFilterRule_cb | Source code |
| designDetailsButton_cb | Source code |
| designModel | Source code |
| designView | Source code |
| designViewWindow | Source code |
| drawColorBox_cb | Source code |
| empty_data_frame | Source code |
| ensureExt | Source code |
| ensureUpdate | Source code |
| entityBookSwitchPage_cb | Source code |
| entityListCols | Source code |
| entityModel | Source code |
| entityPage | Source code |
| entityView | Source code |
| errorDialog | Source code |
| exp_addEntityType | Man page Source code |
| exp_addFilterRule | Man page Source code |
| exp_calcAngleDist | Man page Source code |
| exp_calcCanberraDist | Man page Source code |
| exp_calcCorrelationDist | Man page Source code |
| exp_calcDiff | Man page Source code |
| exp_calcEuclideanDist | Man page Source code |
| exp_calcMahalanobisDist | Man page Source code |
| exp_calcResiduals | Man page Source code |
| exp_calcZeroCorDist | Man page Source code |
| exp_close | Man page Source code |
| exp_colorEntities | Man page Source code |
| exp_dataFrame | Man page Source code |
| exp_dataset | Man page Source code |
| exp_designFactors | Man page Source code |
| exp_designFrame | Man page Source code |
| exp_designSelection | Man page Source code |
| exp_entitiesInList | Man page Source code |
| exp_entityFrame | Man page Source code |
| exp_entitySelection | Man page Source code |
| exp_entityType | Man page Source code |
| exp_entityTypes | Man page Source code |
| exp_expressionSet | Man page Source code |
| exp_featureData | Man page Source code |
| exp_filterRules | Man page Source code |
| exp_findPatterns | Man page Source code |
| exp_ggobi | Man page Source code |
| exp_isRunning | Man page Source code |
| exp_listFrame | Man page Source code |
| exp_listSelection | Man page Source code |
| exp_loadData | Man page Source code |
| exp_loadDesign | Man page Source code |
| exp_loadExpressionSet | Man page Source code |
| exp_loadFiles | Man page Source code |
| exp_loadInfo | Man page Source code |
| exp_loadLists | Man page Source code |
| exp_loadProject | Man page Source code |
| exp_newList | Man page Source code |
| exp_phenoData | Man page Source code |
| exp_removeFilterRules | Man page Source code |
| exp_showClustering | Man page Source code |
| exp_showPatterns | Man page Source code |
| exp_showResults | Man page Source code |
| exp_toggleFilterRules | Man page Source code |
| explorase | Man page |
| fileOpenDialog | Source code |
| fileSaveDialog | Source code |
| filterColumnChanged_cb | Source code |
| filterModel | Source code |
| filterRuleFromGUI | Source code |
| filterView | Source code |
| findAndShowPatterns | Source code |
| findButton_cb | Source code |
| findExtensions | Source code |
| findPatternWindow | Source code |
| finishTask | Source code |
| folderSelectDialog | Source code |
| formatCheck | Source code |
| genPatterns | Source code |
| genUniqueFilterId | Source code |
| getAction | Source code |
| getBrushArea | Source code |
| getBrushColor | Source code |
| getCurrentEntityIds | Source code |
| getDatasets | Source code |
| getDesignModel | Source code |
| getDesignModels | Source code |
| getDesignView | Source code |
| getEntityIds | Source code |
| getEntityModel | Source code |
| getEntityModels | Source code |
| getEntityTypes | Source code |
| getEntityView | Source code |
| getEntityViews | Source code |
| getExploraseVersion | Source code |
| getFilterColumns | Source code |
| getFilterExprs | Source code |
| getFilterModel | Source code |
| getFilterModels | Source code |
| getFilterOps | Source code |
| getGGobiColors | Source code |
| getGGobiEntityColors | Source code |
| getInteractingTerms | Source code |
| getListMatrix | Source code |
| getListModel | Source code |
| getListNames | Source code |
| getListView | Source code |
| getMainWindow | Source code |
| getNLists | Source code |
| getNumEntities | Source code |
| getOpbar | Source code |
| getSelectedData | Source code |
| getStatusbar | Source code |
| getTaskbar | Source code |
| ggobiTreeWindow | Source code |
| highlightEntities | Source code |
| highlightList | Source code |
| hopach_discor | Source code |
| hopach_discosangle | Source code |
| inferEntityType | Source code |
| limmaWindow | Source code |
| limma_cb | Source code |
| listDoubleClick_cb | Source code |
| listModel | Source code |
| listNameEdited_cb | Source code |
| listSelectRow_cb | Source code |
| listView | Source code |
| loadInfoSubset | Source code |
| log_transform_cb | Source code |
| makeContrastCross | Source code |
| makeContrastLinear | Source code |
| makeContrastQuadratic | Source code |
| makeContrastTrt | Source code |
| maxTextWidth | Source code |
| median_cb | Source code |
| mergeFilterRules | Source code |
| mergeInfo | Source code |
| modelFactor_cb | Source code |
| parcoords_cb | Source code |
| printOp | Source code |
| printTask | Source code |
| processFilterRule | Source code |
| projectStarted | Source code |
| propagateEntityInfo | Source code |
| refreshFilter | Source code |
| rootModel | Source code |
| saveFilterRule_cb | Source code |
| scatmat_cb | Source code |
| scrollView | Source code |
| searchBar | Source code |
| searchComboChanged_cb | Source code |
| searchComboModel | Source code |
| selectColor_cb | Source code |
| setBrushColor | Source code |
| setEntityType | Source code |
| setProgress | Source code |
| setup.gobidend | Source code |
| showSubsetSlider_cb | Source code |
| stddev_cb | Source code |
| subsetDialog | Source code |
| subsetEntryActivated_cb | Source code |
| subsetScaleChanged_cb | Source code |
| subsetScaleFormat_cb | Source code |
| subset_cb | Source code |
| syncDesignInfo | Source code |
| syncEntityInfo | Source code |
| temporalWindow | Source code |
| temporal_cb | Source code |
| textColumnsToView | Source code |
| toGGobiColor | Source code |
| toGdkColors | Source code |
| unloadInfo | Source code |
| updateBtn_cb | Source code |
| updateButton_cb | Source code |
| updateColors | Source code |
| updateColumnView | Source code |
| updateEntityView | Source code |
| updateFilterColumnBox | Source code |
| updateModelListColumn | Source code |
| updateSearchComboBox | Source code |
| userCols | Source code |
| varCols | Source code |
| viewColumnWidth_cb | Source code |
| visibleRendererToggled_cb | Source code |
| warningDialog | Source code |
