flowCHIC: Analyze flow cytometric data using histogram information

A package to analyze flow cytometric data of complex microbial communities based on histogram images

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("flowCHIC")
AuthorJoachim Schumann <joachim.schumann@ufz.de>, Christin Koch <christin.koch@ufz.de>, Ingo Fetzer <info.fetzer@stockholmresilience.su.se>, Susann Müller <susann.mueller@ufz.de>
Bioconductor views CellBasedAssays Clustering FlowCytometry Software Visualization
Date of publicationNone
MaintainerAuthor: Joachim Schumann <joachim.schumann@ufz.de>
LicenseGPL-2
Version1.8.0
http://www.ufz.de/index.php?en=16773

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/AllGenerics.R R/calculate_overlaps_xor.R R/fcs_to_img.R R/img_sub.R R/plot_nmds.R
build
build/vignette.rds
data
data/Results_overlaps.txt.gz
data/Results_overlaps_incol.txt.gz
data/Results_overlaps_mix.txt.xz
data/Results_xor.txt.gz
data/Results_xor_incol.txt.bz2
data/Results_xor_mix.txt.xz
data/abiotic_incol.txt.gz
inst
inst/doc
inst/doc/flowCHICmanual.R
inst/doc/flowCHICmanual.Rnw
inst/doc/flowCHICmanual.pdf
inst/extdata
inst/extdata/BCK_30_Sep_11_21.fcs
inst/extdata/BCK_30_Sep_11_30.fcs
inst/extdata/BCK_30_Sep_11_77.fcs
man
man/Results_overlaps.Rd man/Results_overlaps_incol.Rd man/Results_overlaps_mix.Rd man/Results_xor.Rd man/Results_xor_incol.Rd man/Results_xor_mix.Rd man/abiotic_incol.Rd man/calculate_overlaps_xor.Rd man/fcs_to_img.Rd man/flowCHIC_package.Rd man/img_sub.Rd man/plot_nmds.Rd
vignettes
vignettes/flowCHICmanual.Rnw
vignettes/flowCHICmanual.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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