flowFit: Estimate proliferation in cell-tracking dye studies

This package estimate the proliferation of a cell population in cell-tracking dye studies. The package uses an R implementation of the Levenberg-Marquardt algorithm (minpack.lm) to fit a set of peaks (corresponding to different generations of cells) over the proliferation-tracking dye distribution in a FACS experiment.

AuthorDavide Rambaldi
Date of publicationNone
MaintainerDavide Rambaldi <davide.rambaldi@gmail.com>
LicenseArtistic-2.0
Version1.12.0

View on Bioconductor

Functions

coef,parentFittingData-method Man page
coef,proliferationFittingData-method Man page
confint,parentFittingData-method Man page
confint,proliferationFittingData-method Man page
Data,parentFittingData-method Man page
Data,proliferationFittingData-method Man page
flowFit Man page
flowFit-package Man page
generationsDistance Man page
generationsDistance,ANY-method Man page
generationsDistance-methods Man page
getGenerations Man page
getGenerations-methods Man page
getGenerations,proliferationFittingData-method Man page
initialize,parentFittingData-method Man page
initialize,proliferationFittingData-method Man page
logTicks Man page
logTicks,ANY-method Man page
logTicks-methods Man page
parentFitting Man page
parentFittingData Man page
parentFittingData-class Man page
parentFitting,flowFrame-method Man page
parentFitting-methods Man page
plot Man page
plot-methods Man page
plot,parentFittingData,ANY-method Man page
plot,parentFittingData,character-method Man page
plot,parentFittingData,missing-method Man page
plot,proliferationFittingData,ANY-method Man page
plot,proliferationFittingData,character-method Man page
plot,proliferationFittingData,missing-method Man page
proliferationFitting Man page
proliferationFittingData Man page
proliferationFittingData-class Man page
proliferationFitting,flowFrame-method Man page
proliferationFitting-methods Man page
proliferationGrid Man page
proliferationGrid,ANY-method Man page
proliferationGrid-methods Man page
proliferationIndex Man page
proliferationIndex-methods Man page
proliferationIndex,proliferationFittingData-method Man page
show,parentFittingData-method Man page
show,proliferationFittingData-method Man page
summary,parentFittingData-method Man page
summary,proliferationFittingData-method Man page

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