Description Usage Arguments Value Examples
Read in the pop.stats.tab file and plot maps, or line plots of it and optionall sds info
1 2 3 4 |
cruise |
Simplified cruise name (same name as the subdirectory in the seaflow data dir). |
x.var |
X variable: Either map or lat, long or time. |
y.vars |
Y variables: either conc, fluor, or fsc. |
pops |
Which populattions to plot. See the pop datastructure for abreviations to use. |
sds.var |
Which of the sds variables to plot as a secondary axis in a line plot. |
date.range |
date range. |
output.path |
Path to the directory where you wish to output data. |
... |
Additional parameters passed to plot. |
an overview statistics plot file is output to disk
1 2 3 | cruise <- system.file("extdata","seaflow_cruise", package="flowPhyto")
plotCruiseStats(cruise=cruise, output.path='.')
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