pfdPartsList: An example of pfdPartsData
In flowPlots: flowPlots: analysis plots and data class for gated flow cytometry data
Description
Usage
Value
Author(s)
See Also
Examples
Description
The pfd parts data computed from the adultsNeonates data.
Usage
1
Value
a list; pdfPartsData is a list of data frames.
The first data frame holds the compositional percentages for PFD=1; that is, of the cells producing only
one marker, the percentage of cells which express marker1, the percentage of cells which produce marker2, etc.
For example, if there are 4 markers, the data frame for PFD=1 will have a percentage column for each marker, and
the sum of those 4 cols will equal 100
The second data frame has n-choose-2 columns of percentages, where n is the number of markers and 2 is the
polyfunctional degree; i.e. the 2 in PFD=2. And, so on. The length of the list is (maxPFD-1), since
there is only 1 way to achieve maxPFD; that is, all markers are positive when PFD=maxPFD. Each data frame
also contains 'demographic' data describing each row of percentages.
Author(s)
N. Hawkins, Fred Hutchinson Cancer Research Center, Seattle, WA
See Also
Examples
1
2
# Load pfd parts data
data(pfdPartsList)
flowPlots documentation built on Nov. 8, 2020, 7:54 p.m.
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Description Usage Value Author(s) See Also Examples
Description
The pfd parts data computed from the adultsNeonates data.
Usage
1 |
Value
a list; pdfPartsData is a list of data frames. The first data frame holds the compositional percentages for PFD=1; that is, of the cells producing only one marker, the percentage of cells which express marker1, the percentage of cells which produce marker2, etc. For example, if there are 4 markers, the data frame for PFD=1 will have a percentage column for each marker, and the sum of those 4 cols will equal 100 The second data frame has n-choose-2 columns of percentages, where n is the number of markers and 2 is the polyfunctional degree; i.e. the 2 in PFD=2. And, so on. The length of the list is (maxPFD-1), since there is only 1 way to achieve maxPFD; that is, all markers are positive when PFD=maxPFD. Each data frame also contains 'demographic' data describing each row of percentages.
Author(s)
N. Hawkins, Fred Hutchinson Cancer Research Center, Seattle, WA
See Also
Examples
1 2 | # Load pfd parts data
data(pfdPartsList)
|
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