profileData-methods: Method profileData from Class "StackedData"

In flowPlots: flowPlots: analysis plots and data class for gated flow cytometry data

Description

This function is a method of the StackedData class which retrieves the profileData from a StackedData object or which assigns the profileData data slot of a StackedData object.

Usage

   # Get the profileData from a StackedData object.
   profileData(object)    

   # Set the profileData slot of a StackedData object.
   ## S4 replacement method for signature 'StackedData'
profileData(object) <- value
 

Arguments

object	an object of the StackedData class
value	a replacement value

Value

data frame of profile data.

Methods

signature(object = "StackedData")

Get the profileData from the object.

signature(object = "StackedData", value = "data.frame")

Set the value of the profileData slot in the object.

Author(s)

N. Hawkins, Fred Hutchinson Cancer Research Center, Seattle, WA

See Also

StackedData, profileData

Examples

# Load the profile data, create a stackedData object and set the profile data slot
data(profileDF)
# Create a stacked data object
stackedDataObject = new("StackedData")
# Set the profile data slot
profileData(stackedDataObject) = profileDF

# Get the profile data from the stacked data object
profileData = profileData(stackedDataObject)

flowPlots documentation built on Nov. 8, 2020, 7:54 p.m.