gcatest: Genotype Conditional Association TEST

GCAT is an association test for genome wide association studies that controls for population structure under a general class of trait. models.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("gcatest")
AuthorWei Hao, Minsun Song, John D. Storey
Bioconductor views DimensionReduction GenomeWideAssociation PrincipalComponent SNP
Date of publicationNone
MaintainerWei Hao <whao@princeton.edu>, John D. Storey <jstorey@princeton.edu>
LicenseGPL-3
Version1.4.0
https://github.com/StoreyLab/gcatest

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/data.R R/gcat.R
build
build/vignette.rds
data
data/datalist
data/sim_geno.rda
data/sim_trait.rda
inst
inst/doc
inst/doc/gcatest.R
inst/doc/gcatest.Rnw
inst/doc/gcatest.pdf
man
man/gcat.Rd man/sim_geno.Rd man/sim_trait.Rd
src
src/Makevars
src/assoc.c
src/gcatest-init.c
vignettes
vignettes/gcatest.Rnw
vignettes/gcatest.bib

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