Biocview "PrincipalComponent"

A gene-signature ranking method based on sample density in PCA space
An R package for analyzing gene expression data with Principal / Independent Component Analysis
Artificial Components Detection of Differentially Expressed Genes
Artificial Components Detection of Differentially Expressed Genes
Batch Effects Quality Control Software
Batch Effects Quality Control Software
Classes and methods for multi-omics data integration
Classes and methods for multi-omics data integration
Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip
Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip
Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip
Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms
Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms
Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
Genotype Conditional Association TEST
Genotype Conditional Association TEST
Genotype Conditional Association TEST
Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation
Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation
Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation
Infers biological signatures from gene expression data
Infers biological signatures from gene expression data
Interactive Visualization of RNA-seq Data Using a Principal Components Approach
Interactive Visualization of RNA-seq Data Using a Principal Components Approach
Interactive Visualization of RNA-seq Data Using a Principal Components Approach
Interpretable marker-based single-cell pseudotime using Bayesian parametric models
Interpretable marker-based single-cell pseudotime using Bayesian parametric models
Logistic Factor Analysis for Categorical Data
Logistic Factor Analysis for Categorical Data
Logistic Factor Analysis for Categorical Data
Multiple omics data integrative clustering and gene set analysis
Multiple omics data integrative clustering and gene set analysis
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
PathoStat Statistical Microbiome Analysis Package
PathoStat Statistical Microbiome Analysis Package
PathoStat Statistical Microbiome Analysis Package
PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data
PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data
Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation
Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation
rqt: utilities for gene-level meta-analysis
rqt: utilities for gene-level meta-analysis
rqt: utilities for gene-level meta-analysis
rqt: utilities for gene-level meta-analysis
The Cancer Genome Atlas Data Integration
The ClusterSignificance package provides tools to assess if class clusters in dimensionality reduced data representations have a separation different from permuted data
The ClusterSignificance package provides tools to assess if class clusters in dimensionality reduced data representations have a separation different from permuted data
The removal of batch effects from datasets using a PCA and constrained optimisation based technique
The removal of batch effects from datasets using a PCA and constrained optimisation based technique
The removal of batch effects from datasets using a PCA and constrained optimisation based technique
Visualizations of expressionSet Bioconductor object
Visualizations of expressionSet Bioconductor object