DESeq2: Differential gene expression analysis based on the negative binomial distribution

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

Package details

AuthorMichael Love [aut, cre], Constantin Ahlmann-Eltze [ctb], Kwame Forbes [ctb], Simon Anders [aut, ctb], Wolfgang Huber [aut, ctb]
Bioconductor views Bayesian ChIPSeq Clustering DifferentialExpression GeneExpression ImmunoOncology Normalization PrincipalComponent RNASeq Regression Sequencing Transcription
MaintainerMichael Love <>
LicenseLGPL (>= 3)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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DESeq2 documentation built on Feb. 22, 2021, 10 a.m.