esetVis: Visualizations of expressionSet Bioconductor object

Utility functions for visualization of expressionSet (or SummarizedExperiment) Bioconductor object, including spectral map, tsne and linear discriminant analysis. Static plot via the ggplot2 package or interactive via the ggvis or rbokeh packages are available.

AuthorLaure Cougnaud <laure.cougnaud@openanalytics.eu>
Date of publicationNone
MaintainerLaure Cougnaud <laure.cougnaud@openanalytics.eu>
LicenseGPL-3
Version1.0.1

View on Bioconductor

Files

esetVis/DESCRIPTION
esetVis/NAMESPACE
esetVis/R
esetVis/R/esetLda.R esetVis/R/esetPlotWrapper.R esetVis/R/esetSpectralMap.R esetVis/R/esetTsne.R esetVis/R/getGeneSetsForPlot.R esetVis/R/getMethodsInputObjectEsetVis.R esetVis/R/plotTopElements.R
esetVis/build
esetVis/build/vignette.rds
esetVis/inst
esetVis/inst/NEWS
esetVis/inst/doc
esetVis/inst/doc/esetVis-vignette.R
esetVis/inst/doc/esetVis-vignette.Rmd
esetVis/inst/doc/esetVis-vignette.html
esetVis/man
esetVis/man/esetLda.Rd esetVis/man/esetPlotWrapper.Rd esetVis/man/esetSpectralMap.Rd esetVis/man/esetTsne.Rd esetVis/man/getCoordGeneSets.Rd esetVis/man/getGeneSetsForPlot.Rd esetVis/man/getMethodsInputObjectEsetVis.Rd esetVis/man/plotTopElements.Rd
esetVis/vignettes
esetVis/vignettes/custom.css
esetVis/vignettes/esetVis-vignette.Rmd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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