loadTxCounts: Load Transcript Counts
In getDEE2: Programmatic access to the DEE2 RNA expression dataset
Description
Usage
Arguments
Value
Examples
Description
This function loads Kallisto transcript level counts from a downloaded zip
file.
Usage
1
loadTxCounts(zipname)
Arguments
zipname
Path to the zipfile.
Value
a dataframe of transcript expression counts.
Examples
1
2
x <- getDEE2("ecoli",c("SRR1613487","SRR1613488"),outfile="mydata.zip")
y <- loadTxCounts("mydata.zip")
getDEE2 documentation built on Nov. 8, 2020, 7:46 p.m.
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Description Usage Arguments Value Examples
Description
This function loads Kallisto transcript level counts from a downloaded zip file.
Usage
1 | loadTxCounts(zipname)
|
Arguments
zipname |
Path to the zipfile. |
Value
a dataframe of transcript expression counts.
Examples
1 2 | x <- getDEE2("ecoli",c("SRR1613487","SRR1613488"),outfile="mydata.zip")
y <- loadTxCounts("mydata.zip")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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