get_cached_gwascat: use BiocFileCache to retrieve and keep an image of the tsv...
In gwascat: representing and modeling data in the EMBL-EBI GWAS catalog
Description
Usage
Arguments
Note
View source: R/cache_current_gwascat.R
Description
use BiocFileCache to retrieve and keep an image of the tsv file
Usage
1
2
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get_cached_gwascat(
url = "http://www.ebi.ac.uk/gwas/api/search/downloads/alternative",
cache = BiocFileCache::BiocFileCache(),
...
)
Arguments
url
character(1) url to use
cache
BiocFileCache::BiocFileCache instance
...
passed to bfcadd
Note
will If query of cache with 'ebi.ac.uk/gwas' returns 0-row tibble,
will populate cache with bfcadd. Uses readr::read_tsv on cache content to return tibble.
The etag field does not seem to be used at EBI, thus user must check for updates.
gwascat documentation built on Nov. 8, 2020, 11:08 p.m.
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Description Usage Arguments Note
View source: R/cache_current_gwascat.R
Description
use BiocFileCache to retrieve and keep an image of the tsv file
Usage
1 2 3 4 5 | get_cached_gwascat(
url = "http://www.ebi.ac.uk/gwas/api/search/downloads/alternative",
cache = BiocFileCache::BiocFileCache(),
...
)
|
Arguments
url |
character(1) url to use |
cache |
BiocFileCache::BiocFileCache instance |
... |
passed to bfcadd |
Note
will If query of cache with 'ebi.ac.uk/gwas' returns 0-row tibble, will populate cache with bfcadd. Uses readr::read_tsv on cache content to return tibble. The etag field does not seem to be used at EBI, thus user must check for updates.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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