topTraits: operations on GWAS catalog
In gwascat: representing and modeling data in the EMBL-EBI GWAS catalog
Description
Usage
Arguments
Value
Author(s)
Examples
Description
operations on GWAS catalog
Usage
1
topTraits(gwwl, n = 10, tag = "DISEASE/TRAIT")
Arguments
gwwl
instance of {gwaswloc}
n
numeric, number of traits to report
tag
character, name of field to be used for trait enumeration
Value
topTraits returns a character vector of most frequently
occurring traits in the database
locs4trait returns a {gwaswloc} object with
records defining associations to the specified trait
chklocs returns a logical that is TRUE when the asserted locations of
SNP in the GWAS catalog agree with the locations given in the dbSNP package
SNPlocs.Hsapiens.dbSNP144.GRCh37
Author(s)
VJ Carey <stvjc@channing.harvard.edu>
Examples
1
2
gwascat documentation built on Nov. 8, 2020, 11:08 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
operations on GWAS catalog
Usage
1 | topTraits(gwwl, n = 10, tag = "DISEASE/TRAIT")
|
Arguments
gwwl |
instance of |
n |
numeric, number of traits to report |
tag |
character, name of field to be used for trait enumeration |
Value
topTraits returns a character vector of most frequently
occurring traits in the database
locs4trait returns a {gwaswloc} object with
records defining associations to the specified trait
chklocs returns a logical that is TRUE when the asserted locations of
SNP in the GWAS catalog agree with the locations given in the dbSNP package
SNPlocs.Hsapiens.dbSNP144.GRCh37
Author(s)
VJ Carey <stvjc@channing.harvard.edu>
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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