center: Matrix centering

Description Usage Arguments Value Examples

View source: R/lfa.R

Description

C routine to row-center a matrix

Usage

1
center(A)

Arguments

A

matrix

Value

matrix same dimensions A but row centered

Examples

1

Example output

                 EUROPE       EUROPE       EUROPE CENTRAL_SOUTH_ASIA
rs4050954   1.018867925  0.018867925  0.018867925        0.018867925
rs302665   -0.377358491  0.622641509  0.622641509        1.622641509
rs2899446   0.723270440  0.723270440 -1.276729560        0.723270440
rs10069940  0.213836478  0.213836478  0.213836478       -0.786163522
rs6114921   0.515723270  0.515723270 -0.484276730        0.515723270
rs201718   -0.830188679  0.169811321  0.169811321        1.169811321
rs1335715  -0.188679245 -0.188679245 -0.188679245       -0.188679245
rs17006588 -0.490566038  0.509433962 -0.490566038       -0.490566038
rs3885909   0.194968553  0.194968553  0.194968553        0.194968553
rs986457   -0.251572327  0.748427673 -0.251572327       -0.251572327
rs13111401  0.006289308  0.006289308  0.006289308        0.006289308
rs13187858  0.641509434 -0.358490566 -0.358490566       -0.358490566
rs994185   -0.452830189 -0.452830189 -0.452830189       -0.452830189
rs10057812 -1.006289308 -0.006289308  0.993710692       -0.006289308
rs409169   -0.509433962 -0.509433962 -0.509433962       -0.509433962
rs1530933   0.754716981 -0.245283019 -0.245283019       -0.245283019
rs1007833  -0.201257862  0.798742138 -0.201257862       -0.201257862
rs2328383   1.459119497 -0.540880503 -0.540880503       -0.540880503
rs12637969  0.880503145  0.880503145  0.880503145        0.880503145
rs16886475  0.584905660 -0.415094340  0.584905660        0.584905660
rs7726513  -0.628930818 -0.628930818  0.371069182        0.371069182
rs7660731  -0.226415094 -0.226415094 -0.226415094       -0.226415094
rs2188355  -0.716981132 -0.716981132 -0.716981132        0.283018868
rs2189711  -0.981132075  0.018867925  0.018867925        0.018867925
rs9300822  -0.949685535  0.050314465 -0.949685535       -0.949685535
rs722441    0.232704403  0.232704403  1.232704403        0.232704403
rs4919944  -0.402515723  0.597484277  0.597484277        0.597484277
rs12790798 -0.786163522 -0.786163522  0.213836478       -0.786163522
rs8100137  -0.710691824  0.289308176 -0.710691824        1.289308176
rs843408    1.238993711  0.238993711  0.238993711        1.238993711
rs1355274   0.628930818 -0.371069182 -0.371069182        0.628930818
rs8091944   0.088050314 -0.911949686 -0.911949686        0.088050314
rs918807    0.591194969  0.591194969  0.591194969       -0.408805031
rs2463951  -0.522012579  0.477987421 -0.522012579       -0.522012579
rs2033754  -0.559748428 -0.559748428  1.440251572       -0.559748428
rs1349528  -0.534591195 -0.534591195 -0.534591195       -0.534591195
rs2355092  -0.308176101  0.691823899  0.691823899       -0.308176101
rs6817648  -0.106918239  0.893081761  0.893081761       -0.106918239
rs667805    0.572327044 -0.427672956 -0.427672956        0.572327044
rs2164510  -0.220125786 -0.220125786 -0.220125786       -0.220125786
rs1898721   0.735849057 -1.264150943 -0.264150943       -1.264150943
rs6698799  -0.578616352  0.421383648 -0.578616352       -0.578616352
rs751206   -0.433962264 -0.433962264 -0.433962264       -0.433962264
rs10431855  0.213836478  1.213836478 -0.786163522        1.213836478
rs11781405  0.754716981 -0.245283019  0.754716981       -0.245283019
rs10281623 -0.169811321  0.830188679 -0.169811321       -0.169811321
rs12920388  1.088050314  1.088050314  1.088050314        1.088050314
rs4943964  -0.861635220 -0.861635220  0.138364780        1.138364780
rs17030041 -0.257861635  0.742138365 -0.257861635       -0.257861635
rs12691283 -0.484276730 -0.484276730 -0.484276730        0.515723270
rs167701    0.528301887  0.528301887  0.528301887       -0.471698113
rs11177758  0.276729560  0.276729560  1.276729560        0.276729560
rs1920972  -0.157232704  0.842767296 -0.157232704       -0.157232704
rs1400015   0.433962264  0.433962264  0.433962264       -0.566037736
rs8002385  -0.289308176 -0.289308176 -0.289308176       -0.289308176
rs6106434   1.119496855  0.119496855 -0.880503145        1.119496855
rs13203409 -0.767295597 -0.767295597  0.232704403       -0.767295597
rs4918508  -0.547169811 -1.547169811  0.452830189        0.452830189
rs10504369 -0.295597484  0.704402516 -0.295597484       -0.295597484
rs4842386   0.641509434  0.641509434  1.641509434        0.641509434
rs3847362  -0.238993711 -0.238993711  0.761006289       -0.238993711
rs882089    0.415094340 -0.584905660 -0.584905660        1.415094340
rs6017999  -0.226415094 -0.226415094 -0.226415094       -1.226415094
rs2794256  -0.572327044  0.427672956  0.427672956       -0.572327044
rs9653492  -0.452830189 -0.452830189  0.547169811        0.547169811
rs3110228  -0.226415094 -0.226415094 -0.226415094        1.773584906
rs13061796 -0.251572327  0.748427673 -0.251572327        1.748427673
rs4045957  -0.735849057  0.264150943 -0.735849057       -0.735849057
rs11044373  0.672955975 -0.327044025  0.672955975        1.672955975
rs1917717  -0.679245283 -0.679245283  0.320754717       -0.679245283
rs2833890  -0.559748428 -0.559748428 -0.559748428        0.440251572
rs1468559  -0.446540881 -0.446540881  1.553459119       -0.446540881
rs12876549 -0.364779874  0.635220126 -0.364779874       -0.364779874
rs205153    0.817610063  0.817610063 -0.182389937       -0.182389937
rs17587994 -0.113207547 -1.113207547 -1.113207547       -1.113207547
rs17042380 -0.289308176 -0.289308176 -0.289308176        1.710691824
rs1407273  -0.446540881 -0.446540881 -0.446540881       -0.446540881
rs2044732  -0.251572327 -0.251572327 -0.251572327       -0.251572327
rs1858944   0.377358491  0.377358491 -0.622641509        0.377358491
rs11629965  0.377358491  0.377358491 -0.622641509        0.377358491
rs10783764 -0.396226415 -0.396226415 -0.396226415        0.603773585
rs1438220  -0.522012579 -0.522012579  1.477987421       -0.522012579
rs2589858   0.264150943  0.264150943  1.264150943       -0.735849057
rs1933463  -0.333333333  0.666666667 -0.333333333       -0.333333333
rs917491    0.150943396 -0.849056604  1.150943396        0.150943396
rs7100619   0.723270440 -0.276729560 -0.276729560       -0.276729560
rs10497398  0.729559748 -0.270440252  0.729559748       -0.270440252
rs991446    0.402515723  0.402515723 -0.597484277        0.402515723
rs2190095  -0.100628931 -0.100628931  0.899371069        0.899371069
rs12658801 -0.358490566 -0.358490566 -0.358490566       -0.358490566
rs8045131  -0.327044025 -0.327044025 -0.327044025       -0.327044025
rs7718156  -0.427672956 -0.427672956  0.572327044       -0.427672956
rs4398094   0.075471698  1.075471698  1.075471698       -0.924528302
rs10158007 -0.182389937  0.817610063 -0.182389937       -0.182389937
rs4660436  -0.245283019  0.754716981  0.754716981       -0.245283019
rs998318   -0.408805031  1.591194969 -0.408805031        0.591194969
rs6455920  -0.257861635 -0.257861635 -0.257861635       -0.257861635
rs11008578  0.666666667 -0.333333333 -0.333333333       -0.333333333
rs9424114   0.811320755  0.811320755 -0.188679245        0.811320755
rs1552966  -0.402515723  0.597484277 -0.402515723       -0.402515723
rs4900529  -0.339622642 -0.339622642 -0.339622642        0.660377358
rs9575459  -0.855345912 -0.855345912 -0.855345912        0.144654088
rs6755601  -0.540880503 -0.540880503  0.459119497        0.459119497
rs7615155  -1.025157233 -0.025157233 -1.025157233       -0.025157233
rs11638258 -0.333333333 -0.333333333  0.666666667        0.666666667
rs2709050  -0.974842767  0.025157233 -0.974842767       -0.974842767
rs1401618  -0.427672956 -0.427672956  0.572327044        0.572327044
rs11647724 -0.245283019 -0.245283019  0.754716981        0.754716981
rs8093464  -0.264150943 -0.264150943 -0.264150943       -0.264150943
rs11098270  0.823899371 -0.176100629 -0.176100629       -0.176100629
rs3131916   0.226415094  0.226415094 -0.773584906        0.226415094
rs1323619  -0.377358491  0.622641509 -1.377358491       -0.377358491
rs489835    1.283018868 -0.716981132  0.283018868        0.283018868
rs2284689  -0.547169811  0.452830189 -0.547169811       -0.547169811
rs10173535  0.660377358 -0.339622642 -0.339622642        0.660377358
rs1861072  -0.880503145  0.119496855  0.119496855       -0.880503145
rs1521662  -0.691823899  1.308176101 -0.691823899       -0.691823899
rs2453299  -0.232704403 -0.232704403 -0.232704403        0.767295597
rs10163652  0.301886792 -0.698113208 -0.698113208       -0.698113208
rs960700    0.672955975  0.672955975 -0.327044025       -0.327044025
rs1325372   0.440251572  0.440251572  0.440251572        0.440251572
rs4737326   0.748427673 -0.251572327 -0.251572327        0.748427673
rs7689930  -0.421383648  0.578616352  0.578616352       -0.421383648
rs1496286   0.176100629  0.176100629  0.176100629        0.176100629
rs280839    0.094339623 -0.905660377 -0.905660377       -0.905660377
rs16859667 -0.691823899 -0.691823899 -0.691823899       -0.691823899
rs2264759   0.358490566  0.358490566  0.358490566        1.358490566
rs1363749   0.415094340  0.415094340  0.415094340       -0.584905660
rs2618101  -0.421383648 -0.421383648  0.578616352       -0.421383648
rs239328   -0.364779874 -0.364779874  0.635220126        0.635220126
rs728081    0.314465409  0.314465409 -0.685534591        0.314465409
rs4748702   0.220125786  1.220125786 -0.779874214       -0.779874214
rs2165894  -0.509433962 -0.509433962 -0.509433962       -0.509433962
rs2876086  -0.597484277 -0.597484277 -0.597484277       -0.597484277
rs351260   -0.383647799  0.616352201  0.616352201       -0.383647799
rs2201331   1.226415094 -0.773584906 -0.773584906        0.226415094
rs13126098  0.188679245 -0.811320755 -0.811320755       -0.811320755
rs6472867  -0.025157233 -0.025157233 -0.025157233       -1.025157233
rs2045838   0.138364780 -0.861635220  0.138364780        1.138364780
rs6769343  -0.566037736 -0.566037736 -0.566037736        0.433962264
rs12620956 -0.628930818  0.371069182 -0.628930818        0.371069182
rs2049015  -0.157232704  0.842767296 -0.157232704       -0.157232704
rs11152377 -0.427672956  0.572327044  0.572327044       -0.427672956
rs9378220   0.616352201 -0.383647799 -0.383647799        0.616352201
rs10870994  1.773584906 -0.226415094  0.773584906       -0.226415094
rs1404744  -0.949685535 -0.949685535 -0.949685535       -0.949685535
rs2955359   0.264150943  1.264150943  0.264150943       -0.735849057
rs7210758   0.364779874  0.364779874 -0.635220126       -0.635220126
rs4890510   0.377358491 -0.622641509  0.377358491        0.377358491
rs258770   -0.666666667 -0.666666667 -0.666666667        0.333333333
rs7341999  -0.257861635 -0.257861635 -0.257861635       -0.257861635
rs3795818   0.610062893 -0.389937107 -0.389937107        1.610062893
rs427361   -0.389937107  1.610062893 -0.389937107       -0.389937107
rs133280   -0.358490566 -0.358490566 -0.358490566        0.641509434
rs9890637  -0.522012579  0.477987421  0.477987421       -0.522012579
rs497793    0.503144654 -0.496855346  1.503144654        0.503144654
rs861029   -0.421383648  1.578616352 -0.421383648        1.578616352
rs11804627 -0.295597484 -0.295597484 -0.295597484       -0.295597484
rs7275197  -0.408805031  0.591194969  0.591194969       -0.408805031
rs768882    0.691823899  0.691823899 -0.308176101       -0.308176101
rs6437375   0.830188679  0.830188679 -0.169811321        0.830188679
rs11684967 -0.364779874 -0.364779874 -0.364779874       -0.364779874
rs17068931  0.540880503  0.540880503 -0.459119497        0.540880503
rs11111747 -0.232704403 -0.232704403 -0.232704403       -0.232704403
rs883724    0.635220126 -0.364779874 -0.364779874       -0.364779874
rs2806967  -0.729559748 -0.729559748 -0.729559748       -0.729559748
rs9329172  -1.547169811  0.452830189 -0.547169811       -0.547169811
rs10175380 -0.144654088 -1.144654088 -1.144654088       -0.144654088
rs4720303   0.584905660  0.584905660 -0.415094340        1.584905660
rs281380   -0.823899371  0.176100629  0.176100629        1.176100629
rs2426003  -0.301886792 -0.301886792 -0.301886792        0.698113208
rs860750   -0.276729560 -0.276729560 -0.276729560       -0.276729560
rs12895126 -0.679245283 -0.679245283 -0.679245283       -0.679245283
rs2390536   0.716981132 -0.283018868 -0.283018868       -0.283018868
rs10183112 -0.201257862 -0.201257862 -0.201257862        1.798742138
rs17712036  0.798742138  1.798742138 -0.201257862       -0.201257862
rs10860170 -0.301886792  0.698113208 -0.301886792       -0.301886792
rs2117398  -0.584905660  0.415094340  0.415094340        0.415094340
rs10813080  0.194968553  0.194968553  0.194968553       -0.805031447
rs2469764  -0.559748428  0.440251572 -0.559748428        0.440251572
rs1149528   0.660377358 -0.339622642 -0.339622642       -0.339622642
rs11714628  0.352201258  0.352201258  0.352201258        0.352201258
rs3770090  -0.295597484 -0.295597484 -0.295597484       -0.295597484
rs4434187  -0.691823899 -0.691823899  0.308176101        0.308176101
rs4801891   0.396226415 -0.603773585  0.396226415       -0.603773585
rs11067986  0.314465409  0.314465409  0.314465409        0.314465409
rs11634401  1.471698113  0.471698113 -0.528301887       -0.528301887
rs1120439   0.968553459 -1.031446541  0.968553459       -1.031446541
rs1532197  -0.452830189 -0.452830189 -0.452830189       -0.452830189
rs12530984 -0.528301887  0.471698113 -0.528301887        0.471698113
rs16945612 -0.232704403 -0.232704403  0.767295597       -0.232704403
rs11073678 -0.238993711 -0.238993711 -0.238993711        0.761006289
rs1545496   1.106918239  0.106918239  1.106918239       -0.893081761
rs2869675  -0.301886792 -0.301886792 -0.301886792       -0.301886792
rs707093   -0.389937107 -0.389937107 -0.389937107       -0.389937107
rs6725973  -0.194968553 -0.194968553 -0.194968553       -0.194968553
rs8129919   0.069182390  0.069182390  0.069182390        0.069182390
rs7531214   0.427672956  0.427672956  0.427672956       -0.572327044
rs10480523 -0.295597484  0.704402516 -0.295597484       -0.295597484
rs661392    0.138364780  0.138364780  1.138364780        0.138364780
rs10189774 -0.314465409  1.685534591  0.685534591       -0.314465409
rs17607307  0.584905660 -0.415094340  1.584905660        1.584905660
rs10776740 -0.899371069  1.100628931  0.100628931        1.100628931
rs11670672  1.628930818 -0.371069182 -0.371069182       -0.371069182
rs10933902  1.314465409  0.314465409  0.314465409       -0.685534591
rs10515690  1.446540881 -0.553459119 -0.553459119        0.446540881
rs2685230   0.798742138 -0.201257862 -1.201257862        0.798742138
rs998346   -0.584905660 -0.584905660 -0.584905660       -0.584905660
rs2736741  -0.257861635 -0.257861635 -0.257861635       -0.257861635
rs6991080   0.081761006 -0.918238994  0.081761006        0.081761006
rs1350876  -0.628930818 -0.628930818 -0.628930818        0.371069182
rs2075277  -0.647798742  0.352201258  0.352201258       -0.647798742
rs928294   -0.352201258 -0.352201258 -0.352201258       -0.352201258
rs3965461   0.465408805  0.465408805 -0.534591195       -0.534591195
rs11178351  0.641509434  0.641509434  0.641509434        1.641509434
rs6983078   0.578616352  0.578616352 -0.421383648       -0.421383648
rs10012289  1.169811321  0.169811321  0.169811321        0.169811321
rs3856318   0.773584906 -0.226415094  0.773584906       -0.226415094
rs9867817   0.320754717  1.320754717  0.320754717       -0.679245283
rs10758522 -0.320754717 -0.320754717 -0.320754717       -0.320754717
rs16963005 -0.515723270  0.484276730 -0.515723270        0.484276730
rs7989618   0.540880503 -0.459119497 -0.459119497        0.540880503
rs401654   -0.257861635 -0.257861635 -0.257861635        0.742138365
rs325921    0.666666667  0.666666667 -0.333333333       -0.333333333
rs491014   -0.522012579 -0.522012579  0.477987421        1.477987421
rs10503848 -0.905660377  0.094339623  0.094339623        0.094339623
rs3795550   1.106918239  0.106918239  0.106918239       -0.893081761
rs11097475 -1.113207547 -0.113207547 -0.113207547       -0.113207547
rs4664187   0.018867925  0.018867925  0.018867925       -0.981132075
rs2331796   0.440251572  0.440251572 -0.559748428        1.440251572
rs13331974 -0.408805031  0.591194969 -0.408805031       -0.408805031
rs2021997  -0.427672956  0.572327044  0.572327044        0.572327044
rs4932227  -0.320754717  0.679245283  0.679245283       -0.320754717
rs11779911  0.729559748  0.729559748 -0.270440252       -0.270440252
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           CENTRAL_SOUTH_ASIA CENTRAL_SOUTH_ASIA CENTRAL_SOUTH_ASIA
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           CENTRAL_SOUTH_ASIA CENTRAL_SOUTH_ASIA    EAST_ASIA    EAST_ASIA
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