ISOdata: RNA-Seq dataset example for isoforms

In maSigPro: Significant Gene Expression Profile Differences in Time Course Gene Expression Data

Description

ISOdata contains an example of RNA-Seq data at Isoform level.

Usage

data(ISOdata)

Format

A data frame with 2782 rows and 37 columns with RNA-Seq data.

Details

Rows correspond to 2782 isoforms belonging to 1000 gene.

First column is the name of the gene each isoform belongs to.

Remaining columns are the RNA-Seq data samples asociated to 3 replicates of 12 experimental conditions.

Examples

data(ISOdata)
data(ISOdesign)

mdis <- make.design.matrix(ISOdesign)
MyIso <- IsoModel(data=ISOdata[,-1], gen=ISOdata[,1], design=mdis, counts=TRUE)

maSigPro documentation built on Nov. 8, 2020, 6:51 p.m.