maSigPro: Significant Gene Expression Profile Differences in Time Course Gene Expression Data

maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.

AuthorAna Conesa <aconesa@cipf.es>, Maria Jose Nueda <mj.nueda@ua.es>
Date of publicationNone
MaintainerMaria Jose Nueda <mj.nueda@ua.es>
LicenseGPL (>= 2)
Version1.46.0
http://bioinfo.cipf.es/

View on Bioconductor

Functions

average.rows Man page
data.abiotic Man page
edesign.abiotic Man page
edesignCT Man page
edesignDR Man page
get.siggenes Man page
i.rank Man page
make.design.matrix Man page
maSigPro Man page
maSigProUsersGuide Man page
NBdata Man page
NBdesign Man page
PlotGroups Man page
PlotProfiles Man page
position Man page
p.vector Man page
reg.coeffs Man page
see.genes Man page
stepback Man page
stepfor Man page
suma2Venn Man page
T.fit Man page
two.ways.stepback Man page
two.ways.stepfor Man page

Files

maSigPro/DESCRIPTION
maSigPro/NAMESPACE
maSigPro/R
maSigPro/R/PlotGroups.R maSigPro/R/PlotProfiles.R maSigPro/R/T.fit.R maSigPro/R/average.rows.R maSigPro/R/get.siggenes.R maSigPro/R/i.rank.R maSigPro/R/maSigPro.R maSigPro/R/maSigProUsersGuide.R maSigPro/R/make.design.matrix.R maSigPro/R/p.vector.R maSigPro/R/position.R maSigPro/R/reg.coeffs.R
maSigPro/R/see.genes.R
maSigPro/R/stepback.R maSigPro/R/stepfor.R maSigPro/R/suma2Venn.R maSigPro/R/two.ways.stepback.R maSigPro/R/two.ways.stepfor.R
maSigPro/build
maSigPro/build/vignette.rds
maSigPro/data
maSigPro/data/NBdata.rda
maSigPro/data/NBdesign.rda
maSigPro/data/data.abiotic.rda
maSigPro/data/edesign.abiotic.rda
maSigPro/data/edesignCT.rda
maSigPro/data/edesignDR.rda
maSigPro/inst
maSigPro/inst/doc
maSigPro/inst/doc/maSigPro.Rnw
maSigPro/inst/doc/maSigPro.pdf
maSigPro/inst/doc/maSigProUsersGuide.pdf
maSigPro/man
maSigPro/man/NBdata.Rd maSigPro/man/NBdesign.Rd maSigPro/man/PlotGroups.Rd maSigPro/man/PlotProfiles.Rd maSigPro/man/T.fit.Rd maSigPro/man/average.rows.Rd maSigPro/man/data.abiotic.Rd maSigPro/man/edesign.abiotic.Rd maSigPro/man/edesignCT.Rd maSigPro/man/edesignDR.Rd maSigPro/man/get.siggenes.Rd maSigPro/man/i.rank.Rd maSigPro/man/maSigPro.Rd maSigPro/man/maSigProUsersGuide.Rd maSigPro/man/make.design.matrix.Rd maSigPro/man/p.vector.Rd maSigPro/man/position.Rd maSigPro/man/reg.coeffs.Rd maSigPro/man/see.genes.Rd maSigPro/man/stepback.Rd maSigPro/man/stepfor.Rd maSigPro/man/suma2Venn.Rd maSigPro/man/two.ways.stepback.Rd maSigPro/man/two.ways.stepfor.Rd
maSigPro/vignettes
maSigPro/vignettes/maSigPro.Rnw

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