tcga_kirc_example: Example TCGA KIRC RNAseq expression and survival data

Description Usage Format Author(s) Source

Description

A small subset of the TCGA KIRC (kidney renal clear cell carcinoma) expression and survival data, for use as an example for messinaSurv.

Usage

1

Format

a matrix of RNAseq (TCGA platform "illuminahiseq_rnaseqv2") expression estimates kirc.exprs, with genes in rows and patients in columns; and a Surv object kirc.surv, giving patient survival times and status.

Author(s)

Mark Pinese, 20 March 2014.

Source

TCGA, downloaded on 16 Jan 2014, and only a small random subset of genes retained, to reduce size.


messina documentation built on Nov. 17, 2017, 9:12 a.m.