tcga_kirc_example: Example TCGA KIRC RNAseq expression and survival data
In messina: Single-gene classifiers and outlier-resistant detection of differential expression for two-group and survival problems
Description
Usage
Format
Author(s)
Source
Description
A small subset of the TCGA KIRC (kidney renal clear cell
carcinoma) expression and survival data, for use as an
example for messinaSurv.
Usage
1
Format
a matrix of RNAseq (TCGA platform "illuminahiseq_rnaseqv2") expression estimates kirc.exprs,
with genes in rows and patients in columns; and a Surv object kirc.surv, giving patient survival
times and status.
Author(s)
Mark Pinese, 20 March 2014.
Source
TCGA, downloaded on 16 Jan 2014, and only a small random
subset of genes retained, to reduce size.
messina documentation built on Nov. 8, 2020, 7:47 p.m.
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Description Usage Format Author(s) Source
Description
A small subset of the TCGA KIRC (kidney renal clear cell carcinoma) expression and survival data, for use as an example for messinaSurv.
Usage
1 |
Format
a matrix of RNAseq (TCGA platform "illuminahiseq_rnaseqv2") expression estimates kirc.exprs,
with genes in rows and patients in columns; and a Surv object kirc.surv, giving patient survival
times and status.
Author(s)
Mark Pinese, 20 March 2014.
Source
TCGA, downloaded on 16 Jan 2014, and only a small random subset of genes retained, to reduce size.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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